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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATTGTATATTGGCGACGGATTGGGTTCTAATAATTTGGGTTTTGCTGGCTCTGTAAATTCAGgtttgtggtcattaatctgctagtgctagatttctttttgctgagtatctgctagtgctagatattgatttgtcactactccggatttttatgttaaatg...

Basic information

species Glycine max
transcript GLYMA08G14840.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18717577|gb|BM522962.1|BM522962
EST:     CGACGGATTGGGTTCTAATAATTTGGGTTTTGCTGGCTCTGTAAATTCAG                         GAATAACGCTTTTCAAGATGGAGTATGGAAACTGGCTGGAGGAGCAAAATA
genomic: CGACGGATTGGGTTCTAATAATTTGGGTTTTGCTGGCTCTGTAAATTCAGgtttgtggtc ... caatttatagGAATAACGCTTTTCAAGATGGAGTATGGAAACTGGCTGGAGGAGCAAAATA
EST: gi|51344584|gb|CO985317.1|CO985317
EST:     ATAATTTGGGTTTTGCTGGCTCTGTAAATTCAG                         GAATAACGCTTTTCAAGATGGAGTATGGAAACTGGCTGGAGGAGCAAAATA
genomic: ATAATTTGGGTTTTGCTGGCTCTGTAAATTCAGgtttgtggtc ... caatttatagGAATAACGCTTTTCAAGATGGAGTATGGAAACTGGCTGGAGGAGCAAAATA