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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAAgtaagcatatatcttactcttaaatggttagcttcaacaccgtcactgttctgacattcaagcttttgtggtttgcataaacaatctag

Basic information

species Glycine max
transcript GLYMA08G09910.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254331757|gb|GR843607.1|GR843607
EST:     TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAA                         TGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
genomic: TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAAgtaagcatat ... aacaatctagTGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
EST: gi|254331559|gb|GR843516.1|GR843516
EST:     TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAA                         TGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
genomic: TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAAgtaagcatat ... aacaatctagTGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
EST: gi|57575598|gb|CX548573.1|CX548573
EST:     TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAA                         TGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
genomic: TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAAgtaagcatat ... aacaatctagTGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
EST: gi|12690302|gb|BG156638.1|BG156638
EST:     TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAA                         TGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
genomic: TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAAgtaagcatat ... aacaatctagTGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
EST: gi|192302904|gb|FG998586.1|FG998586
EST:     TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAA                         TGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
genomic: TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAAgtaagcatat ... aacaatctagTGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
EST: gi|254331758|gb|GR843608.1|GR843608
EST:     TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAA                         TGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA
genomic: TACATAAATGGGCATGACCACTGCTTGCAGCACATAATTGACAATAATAAgtaagcatat ... aacaatctagTGGAATTCACTTTATAACAAGTGGAGGGGGATCAAAGGCATGGTCAGGCGA