1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTGTAAATTTGGCCCGTTGTGTAGATATCATCATCCACCAGACAAGAGTGCACCAAAAGCAAATGTAACCCTTAGTCCCGTGGGTCTTCCATTGCGTCCGgtaatttcaactcctttgtttggtgctttatatttggttgtgactaacgtatgcttgataaatatcccctttcctaccaaaagttttggtatccagtgat...
species | Glycine max |
transcript | GLYMA07G37980.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTTCCATTGCGTCCG GGGGCACCACCTTGCACTCATTATACCCAGCGTGGAGTTTGCAAGTTTGGTEST: gi|208040586|gb|GD841330.1|GD841330
genomic: CTTCCATTGCGTCCGgtaatttcaa ... tgataatcagGGGGCACCACCTTGCACTCATTATACCCAGCGTGGAGTTTGCAAGTTTGGT
EST: GTCTTCCATTGCGTCCG GGGGCACCACCTTGCACTCATTATACCCAGCGTGGAGTTTGCAAGTTTGGTEST: gi|208235284|gb|GE032060.1|GE032060
genomic: GTCTTCCATTGCGTCCGgtaatttcaa ... tgataatcagGGGGCACCACCTTGCACTCATTATACCCAGCGTGGAGTTTGCAAGTTTGGT
EST: CTTCCATTGCGTCCG GGGGCACCACCTTGCACTCATTATACCCAGCGTGGAGTTTGCAAGTTTGGT
genomic: CTTCCATTGCGTCCGgtaatttcaa ... tgataatcagGGGGCACCACCTTGCACTCATTATACCCAGCGTGGAGTTTGCAAGTTTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTAAATTTGGCCCGTTGTGTAGATATCATCATCCACCAGACAAGAGTGCACCAAAAGCAAATGTAACCCTTAGTCCCGTGGGTCTTCCATTGCGTCCGgtaatttcaactcctttgtttggtgctttatatttggttgtgactaacgtatgcttgataaatatcccctttcctaccaaaagttttggtatccagtgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccctttc