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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCATAGAAATGAAGCTGAAAAGCATTCAGATGTTGAAGACAATTCTGTAGAAAATAACCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCCGATCAGgtttgattgcagttgccattaaggttgcagaacttgactgtacaatcataatgcgccatactgaagaattttagtttaacttttgaatgcatgaatctgg...

Basic information

species Glycine max
transcript GLYMA07G35090.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207730762|gb|GD707887.1|GD707887
EST:     AAAATAACCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCCGATCAG                         GATGAAGCAGGGGACAAATTAGAAGATGTACTTGATAACGATGATGAAGCC
genomic: AAAATAACCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCCGATCAGgtttgattgc ... tttcttacagGATGAAGCAGGGGACAAATTAGAAGATGTACTTGATAACGATGATGAAGCC
EST: gi|151393967|gb|EV263838.1|EV263838
EST:     AAAATAACCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCCGATCAG                         GATGAAGCAGGGGACAAATTAGAAGATGTACTTGATAACGATGATGAAGCC
genomic: AAAATAACCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCCGATCAGgtttgattgc ... tttcttacagGATGAAGCAGGGGACAAATTAGAAGATGTACTTGATAACGATGATGAAGCC