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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTCTTTGACGGCTTTGTTTAAGCACATTGGCAGTGTTGAAGAGCCAAGCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAGgtaagcagataaatgtttgattaatgagccctttattttatttctttttgaaaatggaagtgaatactgaatactaaatatcttcattatag

Basic information

species Glycine max
transcript GLYMA07G32480.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151404452|gb|EV274266.1|EV274266
EST:     GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAG                         GTTTTCCCTATCAAAGCTGAATTGTTGAAACC
genomic: GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAGgtaagcagat ... ttcattatagGTTTTCCCTATCAAAGCTGAATTGTTGAAACC
EST: gi|57574959|gb|CX547934.1|CX547934
EST:     GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAG                         GTTTTCCCTATCAAAGCTGAATTGTTGAAACCACAGGAGGAAATGGAAAGA
genomic: GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAGgtaagcagat ... ttcattatagGTTTTCCCTATCAAAGCTGAATTGTTGAAACCACAGGAGGAAATGGAAAGA
EST: gi|26058897|gb|CA801811.1|CA801811
EST:     GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAG                         GTTTTCCCTATCAAAGCTGAATTGTTGAAACCACAGGAGGAAATGGAAAGA
genomic: GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAGgtaagcagat ... ttcattatagGTTTTCCCTATCAAAGCTGAATTGTTGAAACCACAGGAGGAAATGGAAAGA
EST: gi|58016932|gb|CX703674.1|CX703674
EST:     GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAG                         GTTTTCCCTATCAAAGCTGAATTGTTGAAACCACAGGAGGAAATGGAAAGA
genomic: GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAGgtaagcagat ... ttcattatagGTTTTCCCTATCAAAGCTGAATTGTTGAAACCACAGGAGGAAATGGAAAGA
EST: gi|298193123|gb|HO033557.1|HO033557
EST:     GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAG                         GTTTTCCCTATCAAAGCTGAATTGTTGAAACCACAGGAGGAAATGGAAAGA
genomic: GCACGGATGATGTTATTCGTGAGAAAGTTATAAACTTTGTTCGAGATAAGgtaagcagat ... ttcattatagGTTTTCCCTATCAAAGCTGAATTGTTGAAACCACAGGAGGAAATGGAAAGA