1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GAGTTATCAACAGATTCATCTCAACATGTTCGCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtaaatatcactatctaatctcattatttatattgacataaatttaatacatttaaaaatgtgtctatacaaatgtttcaaaagggataaaaaatcatat...
species | Glycine max |
transcript | GLYMA07G10000.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAG GATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGACEST: gi|14258560|gb|BG881468.1|BG881468
genomic: CACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtaaatatca ... gtggttgcagGATGCTACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
EST: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAG GATGCTACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGACEST: gi|8285673|gb|BE023232.1|BE023232
genomic: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtaaatatca ... gtggttgcagGATGCTACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
EST: GCTCTGCACTGGCTTCCGTTATAATGGGTATGGCACCAGTGTTAGGGAAG GATGCTACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGACEST: gi|192310534|gb|FG999543.1|FG999543
genomic: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtaaatatca ... gtggttgcagGATGCTACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
EST: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAG GATGCTACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGACEST: gi|207846884|gb|GD819103.1|GD819103
genomic: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtaaatatca ... gtggttgcagGATGCTACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
EST: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAG GATGCTACAATTGAGCAACTTCTGCCTTATTTTTCCTTTCTCTTTTGAAAG
genomic: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtaaatatca ... gtggttgcagGATGCTACAATTGAGCAACTTCTGCCT-ATTTT-CCTTTCTCTTTTGAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGTTATCAACAGATTCATCTCAACATGTTCGCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtaaatatcactatctaatctcattatttatattgacataaatttaatacatttaaaaatgtgtctatacaaatgtttcaaaagggataaaaaatcatat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggataaaa