1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CCGCTGAAAAGTTCTAAACTGAACAAAATTGATATGGTGAAGCATGAAAAGTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAGgtatgcgaattttattttacactttgattagaatttgtttttatgttgttttaatgtacggactgttgtgtcgtctatgaaaaacatttaatgcag
species | Glycine max |
transcript | GLYMA07G05530.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAG ATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTGEST: gi|151398241|gb|EV268119.1|EV268119
genomic: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAGgtatgcgaat ... tttaatgcagATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTG
EST: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAG ATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTGEST: gi|151400196|gb|EV270010.1|EV270010
genomic: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAGgtatgcgaat ... tttaatgcagATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTG
EST: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAG ATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTGEST: gi|15815123|gb|BI787398.1|BI787398
genomic: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAGgtatgcgaat ... tttaatgcagATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTG
EST: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAG ATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTGEST: gi|18734852|gb|BM528422.1|BM528422
genomic: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAGgtatgcgaat ... tttaatgcagATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTG
EST: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAG ATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTG
genomic: GTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAGgtatgcgaat ... tttaatgcagATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGCTGAAAAGTTCTAAACTGAACAAAATTGATATGGTGAAGCATGAAAAGTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAGgtatgcgaattttattttacactttgattagaatttgtttttatgttgttttaatgtacggactgttgtgtcgtctatgaaaaacatttaatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA