Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTCTGAGGCAATGTTTGCTGACTTGGGTCACTTTAGTGTGCGAGCCATTCAAgtaagtaaaaaattttggaatataatatacaggaccttcagcttatggcatattaaaggttaatgattgttgcacgtcatttcctttatattatatatct...

Basic information

species Glycine max
transcript GLYMA07G04750.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA07G04750.1 (Glycine max), 5'ss of exon 6
lower sequence: LOC_Os01g70490.1 (Oryza sativa), 5'ss of exon 6
GGTCTGAGGCAATGTTTGCTGACTTGGGTCACTTTAGTGTGCGAGCCATTCAAgtaagtaaaaaattttg----gaatata-atatacaggacct--tcagctta-tggcata----ttaaaggttaatgattgttgcacgtcat---------ttcctttatattatatatct------------------------------------------------------------------
|| | || ||||||||||||||| | |||||||| | |||| |||||||||| ||||| ||  | ||||     ||||  |   | |||  | ||  ||| |  | | ||| |     ||       | |  |  |  | | ||          | | |||  | | | || ||                                                                  
GGACAGAAGCAATGTTTGCTGACCTTGGTCACTTCAATGTGAGAGCCATTCAGgtaaggaagtacttttcctctgaatgcatgcacacaaaaactaatcaacccaatagcaaaactcctagcctcctaggggtactataagacagggattgagatccatttgaactttgtaactgttgttcttgattttcatactactatacttaagacatttaaaataaatatttttgttgcgctgcag