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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCAATGGTCCACAGTGTTCTCTGGTATAGTCTCAAGAGCCATGACTCTAGAAGTGTTATCAACAGGGGTTGCCGGGAACTACAATGGTGCCTTACAAGTGgtacatatatttataagcacatattttatttgttaaagtagtttaacatactatggagttatgctaaagaagcaaatgaaccattttttttttctgcgcatatag

Basic information

species Glycine max
transcript GLYMA06G46000.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208035973|gb|GD833006.1|GD833006
EST:     GCCGGGAACTACAATGGTGCCTTACAAGTG                         ATGACAGCAGAACTACAACTACCTACACCACTTGTGCCAACTCGTGAGAGT
genomic: GCCGGGAACTACAATGGTGCCTTACAAGTGgtacatatat ... gcgcatatagATGACAGCAGAACTACAACTACCTACACCACTTGTGCCAACTCGTGAGAGT
EST: gi|207837773|gb|GD813299.1|GD813299
EST:     AACTACAATGGTGCCTTACAAGTG                         ATGACAGCAGAACTACAACTACCTACGCCACTTGTGCCAACTCATGAGAGT
genomic: AACTACAATGGTGCCTTACAAGTGgtacatatat ... gcgcatatagATGACAGCAGAACTACAACTACCTACACCACTTGTGCCAACTCGTGAGAGT
EST: gi|193410541|gb|FK379846.1|FK379846
EST:     GCCGGGAACTACAATTGGTTGTCCTTACAAGTG                         ATGACAGCAGAACTACAACTACCTACACCACTTGTGCCAACTCGTGAGAGT
genomic: GCCGGGAACTACAA-TGG-TG-CCTTACAAGTGgtacatatat ... gcgcatatagATGACAGCAGAACTACAACTACCTACACCACTTGTGCCAACTCGTGAGAGT