1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACGGCTGGCTTTTTGCAAATTCATGGTAAAACCATCAACTCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGgtttgtctcacttttgccgtgtgcttttccatataaaaaacttactgtcacctttcagcctactgatttctaattcttctcccag
species | Glycine max |
transcript | GLYMA06G15200.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAG GAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGAEST: gi|193518984|gb|FK472789.1|FK472789
genomic: TGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGgtttgtctca ... cttctcccagGAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGA
EST: TGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAG GAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGAEST: gi|27446272|gb|CA953395.1|CA953395
genomic: TGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGgtttgtctca ... cttctcccagGAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGA
EST: TGGATGACCCANCCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAG GAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGAEST: gi|22540684|gb|BU090527.1|BU090527
genomic: TGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGgtttgtctca ... cttctcccagGAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGA
EST: TGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAG GAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGAEST: gi|308099193|gb|HO761426.1|HO761426
genomic: TGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGgtttgtctca ... cttctcccagGAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGA
EST: TGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAG GAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGA
genomic: TGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGgtttgtctca ... cttctcccagGAGGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACGGCTGGCTTTTTGCAAATTCATGGTAAAACCATCAACTCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGgtttgtctcacttttgccgtgtgcttttccatataaaaaacttactgtcacctttcagcctactgatttctaattcttctcccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA