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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCATATCAAGCAGCAACCCTGTTAATTTCTGGCCCATATCTGGATAAACTTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACGgtaagagttaaatagtcttcccaagtcccaaattattattattattattaatgcgttctcaattgtttctttctgcattgcag

Basic information

species Glycine max
transcript GLYMA06G14970.2
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21677608|gb|BQ629959.1|BQ629959
EST:     TTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACG                         GTTTTCATAATTCTTTCCTGCCTTATCTCTATCTCGGTCAATTTCAGTACG
genomic: TTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACGgtaagagtta ... tgcattgcagGTTTTCATAATTCTTTCCTGCCTTATCTCTATCTCGGTCAATTTCAGTACG
EST: gi|208244135|gb|GE042488.1|GE042488
EST:     TTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACG                         GTTTTCATAATTCTTTCCTGCCTTATCTCTATCTCGGTCAATTTCAGTACG
genomic: TTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACGgtaagagtta ... tgcattgcagGTTTTCATAATTCTTTCCTGCCTTATCTCTATCTCGGTCAATTTCAGTACG
EST: gi|16348409|gb|BI974004.1|BI974004
EST:     TTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACG                         GTTTTCATAATTCTTTCCTGCCTTATCTCTATCTCGGTCAATTTCAGTACG
genomic: TTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACGgtaagagtta ... tgcattgcagGTTTTCATAATTCTTTCCTGCCTTATCTCTATCTCGGTCAATTTCAGTACG
EST: gi|8403988|gb|BE059622.1|BE059622
EST:     TTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACG                         GTTTTCATAATTCTTTCCTGCCTTATCT
genomic: TTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACGgtaagagtta ... tgcattgcagGTTTTCATAATTCTTTCCTGCCTTATCT
EST: gi|254314908|gb|GR829901.1|GR829901
EST:     TATACGACACAAGTGACG                         G-TTTCATAA-TCTTTCCTGCC-TATCTCTATCTCGGTCAATTTCAGTACG
genomic: TATACGACACAAGTGACGgtaagagtta ... tgcattgcagGTTTTCATAATTCTTTCCTGCCTTATCTCTATCTCGGTCAATTTCAGTACG