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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGTTGATTGCCGTGTTTGTGGGGATCCTAATTCTATTCTCCGGTTTGCCTTCATTGAGTTTACAGACGAAGgtaacatgaccgccaaatgtatgcatctttgtgattattattaacatttcactgtattaacagtgttgtgcctgcag

Basic information

species Glycine max
transcript GLYMA06G14030.2
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA06G14030.2 (Glycine max), 5'ss of exon 6
lower sequence: Vv16s0098g01040.t01 (Vitis vinifera), 5'ss of exon 5
GTTGTTGATTGCCGTGTTTGTGGGGATCCTAATTCTATTCTCCGGTTTGCCTTCATTGAGTTTACAGACGAAGgtaacatgaccgccaaatgtatgca-tctttgtgat-tatt--attaacatttcactgta--ttaacagtgttgtgcctgcag------------------
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GTTGTTGACTGTCGTATATGTGGTGATCCTAATTCCGTTCTCCGATTTGCCTTCGTTGAATTTACTGATGAGGgta-tgttctgaccttatgtatttaatctttaccgtctatttaagcaatgatcgattttggtttgaccccattaaatttccaaaaaagtgattttcattcc