1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAGGGTTTGACTGCTGAGGAAACAACCAAGAAGGAGCCTGATGAGTCACAACACATGCAGgtcatttttcatttcctgccacaatatcatgttctgttaaactgtgtgacgatatctgctgaccattagcttttctcttcccaggaaacag
species | Glycine max |
transcript | GLYMA05G37830.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTGCTGAGGAAACAACCAAGAAGGAGCCTGATGAGTCACAACACATGCAG ATGACAGGTGCCCGATGCCATAGATGCACAGAGGGTAAGGTGGGCTTGAGGEST: gi|11687901|gb|BF595577.1|BF595577
genomic: CTGCTGAGGAAACAACCAAGAAGGAGCCTGATGAGTCACAACACATGCAGgtcatttttc ... caggaaacagATGACAGGTGCCCGATGCCATAGATGCACAGAGGGTAAGGTGGGCTTGAGG
EST: CTGCTGAGGAAACAACCAAGAAGGAGCCTGATGAGTCACAACACATGCAG ATGACAGGTGCCCGATGCCATATATGCACEST: gi|6914466|gb|AW395996.1|AW395996
genomic: CTGCTGAGGAAACAACCAAGAAGGAGCCTGATGAGTCACAACACATGCAGgtcatttttc ... caggaaacagATGACAGGTGCCCGATGCCATAGATGCAC
EST: ATGAGTCACAACACATGCAG ATGACAGGTGCCCGATGCCATAGATGCACAGAGGGTAAGGTGGGCTTGAGG
genomic: ATGAGTCACAACACATGCAGgtcatttttc ... caggaaacagATGACAGGTGCCCGATGCCATAGATGCACAGAGGGTAAGGTGGGCTTGAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGGTTTGACTGCTGAGGAAACAACCAAGAAGGAGCCTGATGAGTCACAACACATGCAGgtcatttttcatttcctgccacaatatcatgttctgttaaactgtgtgacgatatctgctgaccattagcttttctcttcccaggaaacag
- - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - AAGGAG