1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATTTGGTGAGCTTGCCCTTGGTCCTGAAAGGAAGCCACAAAATGCTGCTTCTTTACAGTTTAGTTTCATGGGTCCCAAGCTCTATGTAAACACAACACCGgtaatgctacttgttttatgttgaactttttgtatccagttggtttgttgttatctttggttccatgatttatgtaattgtgctcacccccccccccccc...
species | Glycine max |
transcript | GLYMA05G33050.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTTTACAGTTTAGTTTCATGGGTCCCAAGCTCTATGTAAACACAACACCG GTTGATGCGGGAAAGAAGCCCGTGACAGGCCTTCGATTGTATTTGGAAGGAEST: gi|19054030|gb|BM732697.1|BM732697
genomic: CTTTACAGTTTAGTTTCATGGGTCCCAAGCTCTATGTAAACACAACACCGgtaatgctac ... ttacatacagGTTGATGTGGGAAAGAAGCCCGTGACAGGCCTTCGATTGTATTTGGAAGGA
EST: CTTTACAGTTTAGTTTCATGGGTCCCAAGCTCTATGTAAACACAACACCG GTTGATGTGGGAAAGAAGCCCGTGACAGGCCTTCGATTGTATTTGGAAGGAEST: gi|208187936|gb|GD983992.1|GD983992
genomic: CTTTACAGTTTAGTTTCATGGGTCCCAAGCTCTATGTAAACACAACACCGgtaatgctac ... ttacatacagGTTGATGTGGGAAAGAAGCCCGTGACAGGCCTTCGATTGTATTTGGAAGGA
EST: TTTACAGTTTAGTTTCTATGGGTCCCAAGCTCTATGTAAACACAACACCG GTTGATGTGGGAAAGAAGCCCGTGACAGGCCTTCGATTGTATTTGGAAGGA
genomic: TTTACAGTTTAGTTTC-ATGGGTCCCAAGCTCTATGTAAACACAACACCGgtaatgctac ... ttacatacagGTTGATGTGGGAAAGAAGCCCGTGACAGGCCTTCGATTGTATTTGGAAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTGGTGAGCTTGCCCTTGGTCCTGAAAGGAAGCCACAAAATGCTGCTTCTTTACAGTTTAGTTTCATGGGTCCCAAGCTCTATGTAAACACAACACCGgtaatgctacttgttttatgttgaactttttgtatccagttggtttgttgttatctttggttccatgatttatgtaattgtgctcacccccccccccccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caccccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccccccc