1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATTACTTTATGGTTGATATTATGGTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAGgtttatatgtttgagagtcctttttcttcttgttacgagggtttaactatcagattttattgatcaagactttaatcatgtttttgccgtgcatatatgtag
species | Glycine max |
transcript | GLYMA05G26630.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAG GGGTTTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTACGGTGGAAGEST: gi|151402287|gb|EV272100.1|EV272100
genomic: GTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAGgtttatatgt ... atatatgtagGGGTTTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTACGGTGGAAG
EST: GTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAG GGGTCTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTACGGTGGAAGEST: gi|151407580|gb|EV277395.1|EV277395
genomic: GTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAGgtttatatgt ... atatatgtagGGGTTTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTACGGTGGAAG
EST: GTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAG GGGTTTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTACGGTGGAAGEST: gi|254327807|gb|GR834772.1|GR834772
genomic: GTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAGgtttatatgt ... atatatgtagGGGTTTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTACGGTGGAAG
EST: GTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAG GGGTTTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTACGGTGGAAGEST: gi|213602225|gb|DB958485.1|DB958485
genomic: GTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAGgtttatatgt ... atatatgtagGGGTTTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTACGGTGGAAG
EST: TGGAAACCTATCAGCGTGCTAGTCATCCTGCCTAAGATNGT-CTTTGCAG GGGTTTCTTTGTTT
genomic: TGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGAT-GTTCTTTGCAGgtttatatgt ... atatatgtagGGGTTTCTTTGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTACTTTATGGTTGATATTATGGTGGAAACCTATCAGCGTGCTAGTCATCCTGTCTAAGATGTTCTTTGCAGgtttatatgtttgagagtcctttttcttcttgttacgagggtttaactatcagattttattgatcaagactttaatcatgtttttgccgtgcatatatgtag
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