1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CTTACTGGGTTTGAAGCTAATCTTTCTTTGAGGGGAAGTCCATACTGGATGGCTCCAGAGgtatagttttactctacattaccctgtaatgtctgtctcgcacattcctcactaacacttcgattctcatacag
species | Glycine max |
transcript | GLYMA05G10050.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTTCTTTGAGGGGAAGT-TTTACTGGATGGCTCCAGAG CTTTTGCAGGCTGTGATACAAAAGGATAACAGCCCTGATCTTGCTTTTGCTEST: gi|9901544|gb|BE610512.1|BE610512
genomic: TTTCTTTGAGGGGAAGTCCATACTGGATGGCTCCAGAGgtatagtttt ... tctcatacagCTTTTGCAGGCTGTGATACAAAAGGATAACAGCCCTGATCTTGCTTTTGCT
EST: TTGAAGCTAATCTTTCTTTGAGGGGAAGTCCATACTGGATGGCTCCAGAG CTNTTGCAGGCTGTGATACAAAAGGATAACAGCCCTGATCTTGCTTTTGCT
genomic: TTGAAGCTAATCTTTCTTTGAGGGGAAGTCCATACTGGATGGCTCCAGAGgtatagtttt ... tctcatacagCTTTTGCAGGCTGTGATACAAAAGGATAACAGCCCTGATCTTGCTTTTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTACTGGGTTTGAAGCTAATCTTTCTTTGAGGGGAAGTCCATACTGGATGGCTCCAGAGgtatagttttactctacattaccctgtaatgtctgtctcgcacattcctcactaacacttcgattctcatacag
- - - - - TTGAAG
- - - - - TGAAGC