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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGAGGCTAATGCGATGGAAAGGATTAGAAAGTTCTTGTATGAAAGTAACAAAAAGACTCCTGTTTTGGTGCCGCGAGTAATACGAAATATGGTTACTAGgtatatgatgcagtttagcatcttacataatcttgacaagatagcattagtaatagacaataatgcttaactcagtatattattttcagagggtagtgct...

Basic information

species Glycine max
transcript GLYMA05G02990.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA05G02990.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv17s0000g10260.t01 (Vitis vinifera), 5'ss of exon 6
GGGAGGCTAATGCGATGGAAAGGATTAGAAAGTTCTTGTATGAAAGTAACAAAAAGACTCCTGTTTTGGTGCCGCGAGTAATACGAAATATGGTTACTAGgtatatgatgcagtttagcatcttacataatcttgacaagatagcattagtaa--tagacaataatg-cttaactcagtatattattttcagagggt-agtgct
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GGGAGGCTGATGCAATGGAAAGAATAAAACGTTTTTTGTATGAGAATAACAAAAAGCGTCCTGTTTTGGTGCCACGGGTAATACGTGATATGGTGACTAGgtatgtaatc--attcagcaattttttccttattg-taatctaaacttgcaaagttaaactaggatctcttttttcagtccataatttgagatttcttggtac-