1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTTGTTTCAAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCCAGGTTAATCAGAGAGATGTTTGGTTATGCACGTGATCACCAGgtgagataattgtgtgaaattgtcttcctataggtttacacatactaattgaaagatgttctaaatctatacattacttgattag
species | Glycine max |
transcript | GLYMA04G03180.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CACGTGATCACCAG CCTTGCATCATTTTTATGGATGAGATCGATGCCATTGGAGGTCGCCGTTTCEST: gi|208336740|gb|GE136012.1|GE136012
genomic: CACGTGATCACCAGgtgagataat ... acttgattagCCTTGCATCATTTTTATGGATGAGATCGATGCCATTGGAGGTCGCCGTTTC
EST: AAAGTGCCAGGTTAATCAGAGAGATGTTTGGTTATGCACGTGATCACCAG CCTTGCATCATTTTTATGGATGAGATCGATGCCATTGGAGGTCGCCGTTTC
genomic: AAAGTGCCAGGTTAATCAGAGAGATGTTTGGTTATGCACGTGATCACCAGgtgagataat ... acttgattagCCTTGCATCATTTTTATGGATGAGATCGATGCCATTGGAGGTCGCCGTTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGTTTCAAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCCAGGTTAATCAGAGAGATGTTTGGTTATGCACGTGATCACCAGgtgagataattgtgtgaaattgtcttcctataggtttacacatactaattgaaagatgttctaaatctatacattacttgattag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG