1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GGCAAAGCTGGAGGGAAACGCGATTTTGGTTTTATTCATTATGCGGAGAGGTCAAGTGCATTGAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATGgtacttgttttatactaaattatgaactaaaatttgtctctgttttcctttttttattaaattgatttctttgcaaaagataacaatagggtgaatccaa...
species | Glycine max |
transcript | GLYMA03G42150.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTCAAGTGCATTGAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATG GCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTGEST: gi|208309096|gb|GE106738.1|GE106738
genomic: GTCAAGTGCATTGAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATGgtacttgttt ... tgaatggcagGCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTG
EST: AGAAATATGAAATTGATG GCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTGEST: gi|208299650|gb|GE098463.1|GE098463
genomic: AGAAATATGAAATTGATGgtacttgttt ... tgaatggcagGCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTG
EST: GAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATG GCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTGEST: gi|18735608|gb|BM528863.1|BM528863
genomic: GAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATGgtacttgttt ... tgaatggcagGCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTG
EST: GTCAAGTGCATTGAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATG GCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTGEST: gi|7591030|gb|AW706771.1|AW706771
genomic: GTCAAGTGCATTGAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATGgtacttgttt ... tgaatggcagGCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTG
EST: GTCAAGTGCATTGAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATG GCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTG
genomic: GTCAAGTGCATTGAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATGgtacttgttt ... tgaatggcagGCCAAATGCTTGAAGTTGTTCTTGCCAAGCCTCAAGCTGATAAAAAACCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCAAAGCTGGAGGGAAACGCGATTTTGGTTTTATTCATTATGCGGAGAGGTCAAGTGCATTGAAAGCTGTAAAAGATACAGAGAAATATGAAATTGATGgtacttgttttatactaaattatgaactaaaatttgtctctgttttcctttttttattaaattgatttctttgcaaaagataacaatagggtgaatccaa
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