1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CCATGATTCAGCAGCCTCGTATTCCTTCCTCTGGGTTGATGCCTGCAAGTGATGTTCTTATTCGTGCAAAGGAGgttagtctactttggttgttcttcattgtgtttttcatcattaggaatgacaaacaaatttggtccccctccccccaaatggttatgattgtttggcaat...
species | Glycine max |
transcript | GLYMA03G39570.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTTCCTCTGGGTTGATGCCTGCAAGTGATGTTCTTATTCGTGCAAAGGAG GTGATAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGAEST: gi|193348287|gb|FK309495.1|FK309495
genomic: CTTCCTCTGGGTTGATGCCTGCAAGTGATGTTCTTATTCGTGCAAAGGAGgttagtctac ... ttttcctcagGTGATAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGA
EST: TATTCGTGCAAAGGAG GTGATAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGAEST: gi|193336968|gb|FK302404.1|FK302404
genomic: TATTCGTGCAAAGGAGgttagtctac ... ttttcctcagGTGATAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGA
EST: TATTCGTGCAAAGGAG GTGATAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGA
genomic: TATTCGTGCAAAGGAGgttagtctac ... ttttcctcagGTGATAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCATGATTCAGCAGCCTCGTATTCCTTCCTCTGGGTTGATGCCTGCAAGTGATGTTCTTATTCGTGCAAAGGAGgttagtctactttggttgttcttcattgtgtttttcatcattaggaatgacaaacaaatttggtccccctccccccaaatggttatgattgtttggcaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccccc