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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCTGCAAGAAGTATTAAATTGTTATTCAGTACCAGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAAgtgagtgatgcatattgttgctcttttagtttatttttctaattgttgatggtgctctagcattcttgatccttatttgttcaccagaaacatcaaatgc...

Basic information

species Glycine max
transcript GLYMA03G34050.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7588625|gb|AW704417.1|AW704417
EST:     ATTCAGTACCAGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAA                         ATTGAGAAAATTCCAGCTGACGAGATAAAGAAAGAGTTGAAAGCTGTTGGT
genomic: ATTCAGTACCAGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAAgtgagtgatg ... ttttgtgcagATTGAGAAAATTCCAGCTGACGAGATAAAGAAAGAGTTGAAAGCTGTTGGT
EST: gi|21675349|gb|BQ627700.1|BQ627700
EST:     ATTCAGTACCAGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAA                         ATTGAGAAAATTCCAGCTGACGAGATAAAGAAAGAGTTGAAA
genomic: ATTCAGTACCAGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAAgtgagtgatg ... ttttgtgcagATTGAGAAAATTCCAGCTGACGAGATAAAGAAAGAGTTGAAA
EST: gi|6951687|gb|AW423755.1|AW423755
EST:     ATTCAGTACCAGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAA                         ATTGAGAAAATTCCAGCTGACGAGATAAAGAAAGAGTTGAAAGCTGTTGGT
genomic: ATTCAGTACCAGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAAgtgagtgatg ... ttttgtgcagATTGAGAAAATTCCAGCTGACGAGATAAAGAAAGAGTTGAAAGCTGTTGGT