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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATACGATTCTACTCATGGTCCATTCAAGGGGTCCATTAATATTTTGGATGACTCTACTTTGGAAATTAATGGGAAGCATGTTAAAGTTGTGAGCAAAAGgtatcatgagttgggctcttataattacaatagatgttacaaatgtactggtttacaaagtgttaaagagttctaaacaacagattaacatgtgcaaattttgttcatgtattcag

Basic information

species Glycine max
transcript GLYMA03G22790.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192322626|gb|FK014363.1|FK014363
EST:     GACTCTACTTTGGAAATTAATGGGAAGCATGTTAAAGTTGTGAGCAAAAG                         AGATCCTGCAGAGATCCCATGGAGCGATTTTGGGGCTGATTATGTCATTGA
genomic: GACTCTACTTTGGAAATTAATGGGAAGCATGTTAAAGTTGTGAGCAAAAGgtatcatgag ... atgtattcagAGATCCTGCAGAGATCCCATGGAGTGATTTTGGGGCTGATTATGTCATTGA
EST: gi|208297585|gb|GE090588.1|GE090588
EST:     GACTCTACTTTGGAAATTAATGGGAAGCATGTTAAAGTTGTGAGCAAAAG                         AGATCCTGCAGAGATCCCATGGAGTGATTTTGGGGCTGATTACGTCATTGA
genomic: GACTCTACTTTGGAAATTAATGGGAAGCATGTTAAAGTTGTGAGCAAAAGgtatcatgag ... atgtattcagAGATCCTGCAGAGATCCCATGGAGTGATTTTGGGGCTGATTATGTCATTGA
EST: gi|207800666|gb|GD775055.1|GD775055
EST:     GACTCTACTTTGGAAATTAATGGGAAGCATGTTAAAGTTGTGAGCAAAAG                         AGATCCTGCAGAGATCCCATGGAGTGATTTTGGGGCTGATTACGTCATTGA
genomic: GACTCTACTTTGGAAATTAATGGGAAGCATGTTAAAGTTGTGAGCAAAAGgtatcatgag ... atgtattcagAGATCCTGCAGAGATCCCATGGAGTGATTTTGGGGCTGATTATGTCATTGA