1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ACTAGCAGAAAGAGCTGAAAATGTTCTACTTTCATTGAAGCAAAGATTCCCAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGgttccattccatgcttctgttaccttattttcatccaatttgcaatattttctctcaaagcctttaacattaacacatttcatttcaaacattcag
species | Glycine max |
transcript | GLYMA02G41980.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAG GATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATGEST: gi|21888799|gb|BQ742012.1|BQ742012
genomic: CAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGgttccattcc ... aaacattcagGATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATG
EST: CAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAG GATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATGEST: gi|57576049|gb|CX549020.1|CX549020
genomic: CAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGgttccattcc ... aaacattcagGATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATG
EST: CAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAG GATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATGEST: gi|18733751|gb|BM527791.1|BM527791
genomic: CAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGgttccattcc ... aaacattcagGATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATG
EST: CAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAG GATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATG
genomic: CAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGgttccattcc ... aaacattcagGATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTAGCAGAAAGAGCTGAAAATGTTCTACTTTCATTGAAGCAAAGATTCCCAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGgttccattccatgcttctgttaccttattttcatccaatttgcaatattttctctcaaagcctttaacattaacacatttcatttcaaacattcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA