Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGCTCATCCACATTGAACAAACTAGCACAAGgttataccctcccttttatacttgtttaattaacacattttcttcaacactactgacctccatacattttcacaacctgtag

Basic information

species Glycine max
transcript GLYMA02G34690.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA02G34690.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv07s0151g00550.t01 (Vitis vinifera), 5'ss of exon 6
---------ATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGCTCATCCACATTGAACAAACTAGCACAAGgttataccctcc-cttttatacttgtttaatt-----aacacattttcttcaacactactgacctccata-cattttcacaacctgtag--------------------
         |||||||||||||| || ||||| ||||| ||||| |||||||||||||| || ||||| ||||||    |||||| ||  ||  ||| ||   ||     |   |||||  ||  ||| |  |  |||  ||  |||||||  |  ||                        
ATGGATCGCATACTTGCTGCATATCGGAAGTCCTCAAAACAGTGGTCATCCACATTGAATAAGCTAGCTCAAGgtgcagccctcctctcctactctttttctgttgttttagtgcatttcttttcaca-tgttatcctttatgtcattttcttattcttctattgcttcacatgcattgcag