1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTGgtaagaatatcactatctcttcttgccccaaatttcacgcagacatttgatctagatgtaggtttcactgttacaaaagttttgtatagagttttgaata...
species | Glycine max |
transcript | GLYMA02G31080.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ACTTGACTCTCACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTG GAGAACTAAAGGAAACAAA-GCCTACAAGAAATGGGEST: gi|193375922|gb|FK342133.1|FK342133
genomic: ACTTGACTCTCACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTGgtaagaatat ... atatatgtagGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGG
EST: ACTTGACTCTCACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTG GAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGGCAAAGAAAATATCAGEST: gi|207795714|gb|GD766907.1|GD766907
genomic: ACTTGACTCTCACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTGgtaagaatat ... atatatgtagGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGGCAAAGAAAATATCAG
EST: ACTTGACTCTCACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTG GAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGGCAAAGAAAATATCAG
genomic: ACTTGACTCTCACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTGgtaagaatat ... atatatgtagGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGGCAAAGAAAATATCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTGgtaagaatatcactatctcttcttgccccaaatttcacgcagacatttgatctagatgtaggtttcactgttacaaaagttttgtatagagttttgaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT