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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGGGACTGTAAATTTGGATTAGCTTGTCGATATCATCATCCTCGCGATCATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCGgtatgtggttactcacttgatgtgattatttaatcgtctgtttaatttcttgattcagttaaattttatgtttatgatactttacggttagactgtctga...

Basic information

species Glycine max
transcript GLYMA02G17260.2
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193682608|gb|FK623370.1|FK623370
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCG                         AACAATTGGATACACGACAGAACA
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCGgtatgtggtt ... tatttaacagAACAATTGGATACACGACAGAACA
EST: gi|58015285|gb|CX702027.1|CX702027
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCG                         AACAATTGGATACACGACAGAACAAGTTATTCCTCTTGAATTCAGGTAGCC
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCGgtatgtggtt ... tatttaacagAACAATTGGATACACGACAGAACAAGTTATTCCTCTTGAATTCAGGTAGCC
EST: gi|22523662|gb|BU082473.1|BU082473
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCG                         AACAATTGGATACACGACAGAACAAGTTATTCCTCTTGAATTCAGGTAGCC
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCGgtatgtggtt ... tatttaacagAACAATTGGATACACGACAGAACAAGTTATTCCTCTTGAATTCAGGTAGCC
EST: gi|58016151|gb|CX702893.1|CX702893
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCG                         AACAATTGGATACACGACAGAACAAGTTATTCCTCTTGAATTCAGGTAGCC
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCGgtatgtggtt ... tatttaacagAACAATTGGATACACGACAGAACAAGTTATTCCTCTTGAATTCAGGTAGCC