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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGGGACTGTAAATTTGGATTAGCTTGTCGATATCATCATCCTCGCGATCATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCGgtatgtggttactcacttgatgtgattatttaatcgtctgtttaatttcttgattcagttaaattttatgtttatgatactttacggttagactgtctga...

Basic information

species Glycine max
transcript GLYMA02G17260.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21677410|gb|BQ629761.1|BQ629761
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCG                         GGGTTACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAATTCGGC
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCGgtatgtggtt ... tagaaaacagGGGTTACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAATTCGGC
EST: gi|207688695|gb|GD671214.1|GD671214
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCG                         GGGTTACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAAT
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCGgtatgtggtt ... tagaaaacagGGGTTACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAAT
EST: gi|17023612|gb|BM094646.1|BM094646
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCG                         GGGTTACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAATTCGGC
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTGGGACTTCCTTTACGTCCGgtatgtggtt ... tagaaaacagGGGTTACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAATTCGGC
EST: gi|207705814|gb|GD686890.1|GD686890
EST:     CTTCCTTTACGTCCG                         GGGTTACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAATTCGGC
genomic: CTTCCTTTACGTCCGgtatgtggtt ... tagaaaacagGGGTTACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAATTCGGC