1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGATTTATCTTAGATACTGGCAGAGGAAACCAGAAACTAAACATAGAGGTGATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAGgtaatttcagcttttagtttgcagcaaaaataagtgattagttgtagtattgtctgtctagattttaagaaactcttttttatgtttttgctgccttgtag
species | Glycine max |
transcript | GLYMA02G07160.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAG ACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAGEST: gi|193492156|gb|FK455224.1|FK455224
genomic: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAGgtaatttcag ... tgccttgtagACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAG
EST: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAG ACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAGEST: gi|15337611|gb|BI498267.1|BI498267
genomic: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAGgtaatttcag ... tgccttgtagACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAG
EST: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAG ACCAGTCATAGACCCTATCGCTTCAATATTEST: gi|27425473|gb|CA936993.1|CA936993
genomic: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAGgtaatttcag ... tgccttgtagACCAGTCATAGACCCTATCGCTTCAATATT
EST: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAG ACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAGEST: gi|10233075|gb|BE802020.1|BE802020
genomic: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAGgtaatttcag ... tgccttgtagACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAG
EST: GAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAG ACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAGEST: gi|192303510|gb|FG994488.1|FG994488
genomic: GAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAGgtaatttcag ... tgccttgtagACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAG
EST: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAG ACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAG
genomic: GATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAGgtaatttcag ... tgccttgtagACCAGTCATAGACCCTATCGCTTCAATATTTCATCGAATGCTCTGTGGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATTTATCTTAGATACTGGCAGAGGAAACCAGAAACTAAACATAGAGGTGATCTGAGTGAAGATTTTGCTTTCTCCACATTTTTCCCAGAATTTTTAAGgtaatttcagcttttagtttgcagcaaaaataagtgattagttgtagtattgtctgtctagattttaagaaactcttttttatgtttttgctgccttgtag
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