1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GAAAGATGGTGAGCAGCAAGCTAGCCCACAGGATACAACAATGACTGAGGGTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACGgttggtgtaactggttattttagccatgtttgttgcctgttttgtcatatgcttgtttggattataaaacaattatctaaattcatataagtagtttgta...
species | Glycine max |
transcript | GLYMA02G05250.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACG GACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGATEST: gi|12772393|gb|BG237320.1|BG237320
genomic: GTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACGgttggtgtaa ... acaaaagcagGACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGAT
EST: GTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACG GACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGATEST: gi|254335038|gb|GR844823.1|GR844823
genomic: GTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACGgttggtgtaa ... acaaaagcagGACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGAT
EST: GTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACG GACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGATEST: gi|254335039|gb|GR844824.1|GR844824
genomic: GTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACGgttggtgtaa ... acaaaagcagGACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGAT
EST: GTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACG GACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGATEST: gi|308099085|gb|HO760926.1|HO760926
genomic: GTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACGgttggtgtaa ... acaaaagcagGACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGAT
EST: GTGCCAGTGCAGCAACTTCTGAAGCCGAGACTAAGAGAACTGATTTGACG GACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGATEST: gi|31470062|gb|CD412090.1|CD412090
genomic: GTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACGgttggtgtaa ... acaaaagcagGACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGAT
EST: CCGAGACTAAGAGAACTGATTTGACG GACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGAT
genomic: CCGAGACTAAGAGAACTGATTTGACGgttggtgtaa ... acaaaagcagGACGATGAGAATGCTCTTCTACAGCAGGCCCTTGCAATGTCAATGGATGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAGATGGTGAGCAGCAAGCTAGCCCACAGGATACAACAATGACTGAGGGTGCCAGTGCAGCAGCTTCTGAAGCCGAGACTAAGAGAACTGATTTGACGgttggtgtaactggttattttagccatgtttgttgcctgttttgtcatatgcttgtttggattataaaacaattatctaaattcatataagtagtttgta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA