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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGCCCTTAGAGGAGTTAAAGTCGAAGTAACCCACCGAGGGAGTGTTAGAAGAAAGTATCGAGTTTCTGGTTTGACTTGTCAACCAACCAGAGAACTTGTgtaagtaataattctgttttataatattttattttaatatatatagtaactcttcttctacactaagttcaaagatattccaattattttcctctagttttcttgatgacaaggatgtatctctttag

Basic information

species Glycine max
transcript GLYMA02G00510.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA02G00510.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv05s0020g04190.t01 (Vitis vinifera), 5'ss of exon 6
AAGCCCTTAGAGGAGTTAAAGTCGAAGTAACCCACCGAGGGAGTGTTAGAAGAAAGTATCGAGTTTCTGGTTTGACTTGTCAACCAACCAGAGAACTTGTgtaagtaataattctgttttataatattttattttaatatatatagtaactcttcttctacactaagttcaaagatattccaattattttcctctagttttcttgatgacaaggatgtatctctttag
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AGGCCCTTAGAGGAGTAAAAGTTGAAGTAACACACAGAGGGAATGTACGAAGAAAGTATCGTGTATCAGGACTAACATCCCAACCTACAAGAGAACTAGTgtaag--atc-tcttgttttgc------ttctcttgat-tgtgcagtcacaatttacatgctgttactttct--tcattccaagaagattatgatag----ctaaataacaattgt------------