1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCTgtaagaatctataattttacacgtacaattccttttctagtttttaacttgttgctttatctgtgtttctacatattcaattgctaattgtatttataca...
species | Glycine max |
transcript | GLYMA01G41570.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCT GTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTTEST: gi|24136207|gb|BU926717.1|BU926717
genomic: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCTgtaagaatct ... tttggaacagGTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTT
EST: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCT GTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTTEST: gi|207751210|gb|GD726213.1|GD726213
genomic: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCTgtaagaatct ... tttggaacagGTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTT
EST: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCT GTTAAAAACTTTATCTCTTTAGCAGGCCCTEST: gi|213613400|gb|DB956914.1|DB956914
genomic: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCTgtaagaatct ... tttggaacagGTTAAAAACTTTATCTCTTTAGCAGGCCCT
EST: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCT GTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTTEST: gi|21285430|gb|BQ473301.1|BQ473301
genomic: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCTgtaagaatct ... tttggaacagGTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTT
EST: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCT GTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTTEST: gi|9901990|gb|BE610958.1|BE610958
genomic: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCTgtaagaatct ... tttggaacagGTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTT
EST: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCT GTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTT
genomic: GAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCTgtaagaatct ... tttggaacagGTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAATTTAATTGGTCGAGGCGTTGTGGAATTTTGTGAAGGAGGACCTCCTgtaagaatctataattttacacgtacaattccttttctagtttttaacttgttgctttatctgtgtttctacatattcaattgctaattgtatttataca
- - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - GGAGGA