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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATGTAGGGGAATGGATCATACAAGGAGAGAAGAAGTTCGTTGGGGGTCATATAGATGTCCCAGAATTCTCATTTGGTGAACTAGATGAATTGCAGgtacctcttaatgttgattttgatttaaacacttttgagctactaaaaaattgagaagggtcataagctgtttggaaaagtgcatggtcagaagagttga...

Basic information

species Glycine max
transcript GLYMA01G00400.2
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58020236|gb|CX706978.1|CX706978
EST:     GTCATATAGATGTCCCAGAATTCTCATTTGGTGAACTAGATGAATTGCAG                         GTTGAAGTGAGACTGAGTGAAGCAAGGGATATCTTGCATCAAGACAAGACA
genomic: GTCATATAGATGTCCCAGAATTCTCATTTGGTGAACTAGATGAATTGCAGgtacctctta ... atttcaacagGTTGAAGTGAGACTGAGTGAAGCAAGGGATATCTTGCATCAAGACAAGACA
EST: gi|192321032|gb|FK013520.1|FK013520
EST:     GTCATATAGATGTCCCAGAATTCTCATTTGGTGAACTAGATGAATTGCAG                         GTTGAAGTGAGACTGAGTGAAGCAAGGGATATCTTGCATCAAGACAAGACA
genomic: GTCATATAGATGTCCCAGAATTCTCATTTGGTGAACTAGATGAATTGCAGgtacctctta ... atttcaacagGTTGAAGTGAGACTGAGTGAAGCAAGGGATATCTTGCATCAAGACAAGACA
EST: gi|21994329|gb|BQ785857.1|BQ785857
EST:     GTCATATAGATGTCCCAGAATTCTCATTTGGTGAACTAGATGAATTGCAG                         GTTGAAGTGAGACTGAGTGAAGCAAGGGATATCTTGCATCAAGACAAGACA
genomic: GTCATATAGATGTCCCAGAATTCTCATTTGGTGAACTAGATGAATTGCAGgtacctctta ... atttcaacagGTTGAAGTGAGACTGAGTGAAGCAAGGGATATCTTGCATCAAGACAAGACA