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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAATCTTGCTTATAACAACATCACAGGGACAGTACCTTATTCGATTTCTAACTTGACTGCTCTTACTGACCTgtgtgtaattttcttcttgtaaatttatcatttgtatcaaccaccacaagaagcacctggagtaattttatttttttttttggttttttatgcag

Basic information

species Glycine max
transcript GLYMA19G45130.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|20814899|gb|BQ299377.1|BQ299377
EST:     ACAGGGACAGTACCTTATTCGATTTCTAACTTGACTGCTCTTACTGACCT                         GAATTTTAGTCACAATCAGCTCCAGCAAGGACTGGGTGTTGACTTTCTTAA
genomic: ACAGGGACAGTACCTTATTCGATTTCTAACTTGACTGCTCTTACTGACCTgtgtgtaatt ... ttttatgcagGAATTTTAGTCACAATCAGCTCCAGCAAGGACTGGGTGTTGACTTTCTTAA
EST: gi|213595224|gb|DB962363.1|DB962363
EST:     ACAGGGACAGTACCTTATTCGATTTCTAACTTGACTGCTCTTACTGACCT                         GAATTTTAGTCACAATCAGCTCCAGCAAGGACTGGGTGTTGACTTTCTTAA
genomic: ACAGGGACAGTACCTTATTCGATTTCTAACTTGACTGCTCTTACTGACCTgtgtgtaatt ... ttttatgcagGAATTTTAGTCACAATCAGCTCCAGCAAGGACTGGGTGTTGACTTTCTTAA
EST: gi|20814831|gb|BQ299309.1|BQ299309
EST:     ACAGGGACAGTACCTTATTCGATTTCTAACTTGACTGCTCTTACTGACCT                         GAATTTTAGTCACAATCAGCTCCAGCAAGGACTGGGTGTTGACTTTCTTAA
genomic: ACAGGGACAGTACCTTATTCGATTTCTAACTTGACTGCTCTTACTGACCTgtgtgtaatt ... ttttatgcagGAATTTTAGTCACAATCAGCTCCAGCAAGGACTGGGTGTTGACTTTCTTAA