1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGCTCAGGCTGATGGTCCAAAGAAGCATCATACACGTGATCGTGCTGCAAAAGCTTTTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCAATATTGATgtacgttcaaaaagagtacttatatcaataatcacaagtatactagagacgctttgctttgtttataaaaccaccgaatagatgtgctttgagattatta...
species | Glycine max |
transcript | GLYMA19G42960.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AAGCTTTTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCAATATTGAT AGAAGACGTCTAATCACTCATGCAAATGCCAAGAGCAAGAGCGAAAAGTTTEST: gi|21256192|gb|BQ453080.1|BQ453080
genomic: AAGCTTTTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCAATATTGATgtacgttcaa ... tgtgtaacagAGAAGACGTCTAATCACTCATGCAAATGCCAAGAGCAAGAGCGAAAAGTTT
EST: AAGCTTTTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCAATATTGAT AGAAGACGTCTAATCACTCATGCAAATGCCAAGAGCAAGAGCGAAAAGTTT
genomic: AAGCTTTTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCAATATTGATgtacgttcaa ... tgtgtaacagAGAAGACGTCTAATCACTCATGCAAATGCCAAGAGCAAGAGCGAAAAGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTCAGGCTGATGGTCCAAAGAAGCATCATACACGTGATCGTGCTGCAAAAGCTTTTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCAATATTGATgtacgttcaaaaagagtacttatatcaataatcacaagtatactagagacgctttgctttgtttataaaaccaccgaatagatgtgctttgagattatta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caaaaaga