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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCAGgtaatcctcatattttctcacactaacatctttaaatacattcaattcaaggttcaaagagttttcagctgatccttgtgctgatgattcag

Basic information

species Glycine max
transcript GLYMA19G41120.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22524028|gb|BU082839.1|BU082839
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|7796797|gb|AW782191.1|AW782191
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|254322390|gb|GR837804.1|GR837804
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|298196328|gb|HO044719.1|HO044719
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|208239211|gb|GE037205.1|GE037205
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|7925061|gb|AW831087.1|AW831087
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|7591427|gb|AW707160.1|AW707160
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|192330291|gb|FK020576.1|FK020576
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|13480326|gb|BG509669.1|BG509669
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|192314667|gb|FK005949.1|FK005949
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|120493127|gb|EH221294.1|EH221294
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|6454707|gb|AW185390.1|AW185390
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|151407971|gb|EV277786.1|EV277786
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|9986531|gb|BE660639.1|BE660639
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|9986532|gb|BE660640.1|BE660640
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|23064266|gb|BU579039.1|BU579039
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|254320264|gb|GR831072.1|GR831072
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|19452880|gb|BM954290.1|BM954290
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|24136646|gb|BU927156.1|BU927156
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|19934893|gb|BQ079914.1|BQ079914
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|22524928|gb|BU083739.1|BU083739
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|192314666|gb|FK005948.1|FK005948
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|6482896|gb|AW202106.1|AW202106
EST:     TGGGAAGAATTCTAGATCAG
genomic: TGG-AAGAATTCTAGATCAG
EST: gi|19452860|gb|BM954270.1|BM954270
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|7692565|gb|AW760668.1|AW760668
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|298174540|gb|HO017763.1|HO017763
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|23733671|gb|BU765041.1|BU765041
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|21889139|gb|BQ742352.1|BQ742352
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|11688232|gb|BF595908.1|BF595908
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|24205547|gb|BU964800.1|BU964800
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG