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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACTAAGGAGAAGATGGAGATGACTACACCTGTTTTCACAAGTAAGAATCAATCTGATGGGGTTAAAATGGACATGACAACTCCTGTGTTAACAACAAAGgtattatgattatttttcatggattttgtgaaatgtctcatttacaatctctatcttatttatttttatatggattgcccacaagtttagtataactata...

Basic information

species Glycine max
transcript GLYMA19G38010.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15285042|gb|BI468933.1|BI468933
EST:     AATCTGATGGGGTTAAAATGGACATGACAACTCCTGTGTTAACAACAAAG                         ATGGAAGATCAAGATAATTGGAAAATGTCTTTTGTCATGCCATCAAAGTAT
genomic: AATCTGATGGGGTTAAAATGGACATGACAACTCCTGTGTTAACAACAAAGgtattatgat ... attatcttagATGGAAGATCAAGATAATTGGAAAATGTCTTTTGTCATGCCATCAAAGTAT
EST: gi|51341683|gb|CO983000.1|CO983000
EST:     AATCTGATGGGGTTAAAATGGACATGACAACTCCTGTGTTAACAACAAAG                         ATGGAAGATCAAGATAATTGGAAAATGTCTTTTGTCATGCCATCAAAGTAT
genomic: AATCTGATGGGGTTAAAATGGACATGACAACTCCTGTGTTAACAACAAAGgtattatgat ... attatcttagATGGAAGATCAAGATAATTGGAAAATGTCTTTTGTCATGCCATCAAAGTAT