1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTATGGTAACAAGAAGGCGTATGGGCAGTCCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAGgtcatccatctagtgctgtgcttctctgaccttctccataaacctgaaataaatttcaatgtagaaaatgataaacaaacaaacaaagaaataatgtcta...
species | Glycine max |
transcript | GLYMA19G35630.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAG GAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATGEST: gi|31310906|gb|CD396109.1|CD396109
genomic: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAGgtcatccatc ... ttgtgtgcagGAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATG
EST: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAG GAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATGEST: gi|31561130|gb|CD486968.1|CD486968
genomic: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAGgtcatccatc ... ttgtgtgcagGAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATG
EST: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAG GAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATGEST: gi|31474583|gb|CD416611.1|CD416611
genomic: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAGgtcatccatc ... ttgtgtgcagGAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATG
EST: TGAGCTTTCTCGTCGCCTGCAG GAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATGEST: gi|151409303|gb|EV279111.1|EV279111
genomic: TGAGCTTTCTCGTCGCCTGCAGgtcatccatc ... ttgtgtgcagGAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATG
EST: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAG GAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATGEST: gi|7234016|gb|AW569357.1|AW569357
genomic: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAGgtcatccatc ... ttgtgtgcagGAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATG
EST: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAG GAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATGEST: gi|31459767|gb|CD401795.1|CD401795
genomic: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAGgtcatccatc ... ttgtgtgcagGAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATG
EST: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAG GAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATG
genomic: CCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAGgtcatccatc ... ttgtgtgcagGAAGAGGGTGTGAATATCACAGCCAACTCGGTCCATCCAGGAGTGATAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTATGGTAACAAGAAGGCGTATGGGCAGTCCAAGTTAGCAAACATATTACATACAAATGAGCTTTCTCGTCGCCTGCAGgtcatccatctagtgctgtgcttctctgaccttctccataaacctgaaataaatttcaatgtagaaaatgataaacaaacaaacaaagaaataatgtcta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaatga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caaagaaa