Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGTAGTAGGATAAAGTGGAATTTCACTAAGTTTTTGGTTGACAAGGAAGGGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAAgtacaatctctctctatttctctccatggagtgcatatgtgagattatgttcgttccatttggattttgacgtctcagccttgaacaatgacgaatcctg...

Basic information

species Glycine max
transcript GLYMA19G33650.3
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10709776|gb|BF009500.1|BF009500
EST:     GGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAA                         AATGACATCAAGACAGCATTGGGGGAGGCTTGAAAGACTCTACAATCACTT
genomic: GGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAAgtacaatctc ... gcctttacagAATGACATCAAGACAGCATTGGGGGAGGCTTGAAAGACTCTACAATCACTT
EST: gi|208145473|gb|GD940872.1|GD940872
EST:     GGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAA                         AATGACATCAAGACAGCATTGGGGGAGGCTTGAAAGACTCTACAATCACTT
genomic: GGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAAgtacaatctc ... gcctttacagAATGACATCAAGACAGCATTGGGGGAGGCTTGAAAGACTCTACAATCACTT
EST: gi|207766244|gb|GD737774.1|GD737774
EST:     GGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAA                         AATGACATCAAGACAGCATTGGGGGAGGCTTGAAAGACTCTACAATCACTT
genomic: GGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAAgtacaatctc ... gcctttacagAATGACATCAAGACAGCATTGGGGGAGGCTTGAAAGACTCTACAATCACTT
EST: gi|207802831|gb|GD776144.1|GD776144
EST:     GGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAA                         AATGACATCAAGACAGCATTGGGGGAGGCTTGAAAG
genomic: GGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAAgtacaatctc ... gcctttacagAATGACATCAAGACAGCATTGGGGGAGGCTTGAAAG