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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCTGAGAGAACTGTTCAGATTGCTTTGGCAAAAGCATCCTTGGTTGATGATCTGCAAAACAAAAATCAAGAGTTAATGAAACAGATTGAAATATGCCAGgtttgtgattctttttttttttgaaaaaaaaataatttttgcttatacttgctagtaaggcacatattttacatactcaattagtggaatgcaaaatttaatgaagtatgttacactcttatgttag

Basic information

species Glycine max
transcript GLYMA19G31040.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G31040.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv08s0007g05140.t01 (Vitis vinifera), 5'ss of exon 5
GGCTGAGAGAACTGTTCAGATTGCTTTGGCAAAAGCATCCTTGGTTGATGATCTGCAAAACAAAAATCAAGAGTTAATGAAACAGATTGAAATATGCCAGgtttgtgattctttttttttttgaaaaaaaaataatttttgcttatacttgcta-gtaaggcacatattttac-atactcaattagtgga--atgcaaaatttaatgaagtatgttacactcttatgttag
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GGCTGAGAGAACTGTTGAGATTGCTTTGGCAAAAGCATCCTTGGTTGATGATCTGCAAAACAAAAACCAAGAACTCATGAAGCAGATTGAAATATGCCAGgtttg----tctatttttc--------aaattctgcttttgcctatgcttttcaagtatatgaaataatttgctatggtgtaccagtgagtggtacagaattgggtttaacatatat--ctattataacag