1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GCCCGTCACAATGGTCAGAACTATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCAgtaagttcttttttatctaaagtcttctattttatttagtaaagtaattttataaatttttctaagttgactgatggaaaatgttaggccaccaatacct...
species | Glycine max |
transcript | GLYMA19G24620.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATGTTTTTGCCCTTCTGACTGGTTATCGTGACCCACCTGCTGGTGTTTCG ATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCCEST: gi|298178076|gb|HO027459.1|HO027459
genomic: ATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCAgtaagttctt ... aataatgtagATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCC
EST: ATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCA ATAAGAGAGGGACTTCATTATAATCCTTGCTTTCCTGGTGGAGCAATTGCCEST: gi|208300265|gb|GE098924.1|GE098924
genomic: ATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCAgtaagttctt ... aataatgtagATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCC
EST: CGTGACCCACCTGCTGGTGTTTCG ATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCCEST: gi|151405823|gb|EV275638.1|EV275638
genomic: CGTGACCCACCTGCTGGTGTTTCAgtaagttctt ... aataatgtagATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCC
EST: ATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCA ATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCCEST: gi|13240163|gb|BG359472.1|BG359472
genomic: ATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCAgtaagttctt ... aataatgtagATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCC
EST: ATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCA ATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCCEST: gi|254330991|gb|GR842256.1|GR842256
genomic: ATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCAgtaagttctt ... aataatgtagATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCC
EST: ATGTTTTTGCCCTTCTGACTGGTTATCGTGACCCACCTGCTGGTGTTTCG ATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCC
genomic: ATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCAgtaagttctt ... aataatgtagATAAGAGAGGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCCGTCACAATGGTCAGAACTATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCACCTGCTGGTGTTTCAgtaagttcttttttatctaaagtcttctattttatttagtaaagtaattttataaatttttctaagttgactgatggaaaatgttaggccaccaatacct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccaccaa