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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGAACTCACAACTATTGGAAGTATTATAGCCGCTGCTGGTGCTGGTGCAGCAACAGCGATTTCTACAAATCCATTGTGGGTTGTTAAGACAAGACTTCAAgtaagttagtgcttctcttgtctgtaatcttagtaaaatatttgtgaaaataggagtctacaatcttctcatttattattcttgttcgtttctactcaat...

Basic information

species Glycine max
transcript GLYMA19G21930.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G21930.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv01s0011g03920.t01 (Vitis vinifera), 5'ss of exon 5
CGAACTCACAACTATTGGAAGTATTATAGCCGCTGCTGGTGCTGGTGCAGCAACAGCGATTTCTACAAATCCATTGTGGGTTGTTAAGACAAGACTTCAAgtaagttagtgcttctcttgtctgtaatcttagtaaaatatttgtgaaaataggagtctacaatcttctcatttattattcttgttcgtt-tctactcaat-
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TCAACTTACAATTGGTGCAAATGTGATAGCTGCTTCAGGAGCTGGGGCTGCCACAGCAATTACAACGAATCCATTGTGGGTTGTTAAGACCAGACTCCAAgtaagtta-tgcatcactgtgttctgattcct-tctgatacctatagaagaacatcgtaagatgtttctcatattttgctcatctctgtggtcccttccatt