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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACTgtcagtacagattctttacctatcttcggttatcttgtttttagaagagtagtaaattagtaataaatttgatggtttgtcatatgtttgaaataaccaa...

Basic information

species Glycine max
transcript GLYMA19G18340.3
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254316869|gb|GR828406.1|GR828406
EST:     GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACT                         ATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC
genomic: GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACTgtcagtacag ... attttttcagATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC
EST: gi|17518794|gb|BM187836.1|BM187836
EST:     GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACT                         ATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC
genomic: GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACTgtcagtacag ... attttttcagATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC
EST: gi|254316868|gb|GR828405.1|GR828405
EST:     GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACT                         ATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC
genomic: GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACTgtcagtacag ... attttttcagATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC
EST: gi|6567025|gb|AW234652.1|AW234652
EST:     GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACT                         ATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC
genomic: GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACTgtcagtacag ... attttttcagATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC
EST: gi|58024651|gb|CX711392.1|CX711392
EST:     GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACT                         ATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC
genomic: GTTAATCTTCACCAATGGGACCAAGTAAAACCATATGACGGAAAAACTgtcagtacag ... attttttcagATTTTAATTCAAGGAATGCCTCGAGCAGGTACATATGAAGATATAGGACGC