1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGAAAATGGAAGGTCAAGGTGTTACAAGATGATAAACTTTACGAGGTTGATGAATTCTCAACCGATGAAGGGAGAAAAATGCTCCATACTGAAGGATTTAggtacgcatataattctctctctctccctctctcacatgcattgggtttgctaattaaaactaatattcacctcaatatagcacttttgtgtaattctct...
species | Glycine max |
transcript | GLYMA18G49470.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGAATTCTCAACCGATGAAGGGAGAAAAATGCTCCACACTGAAGGATTTA GATTCTTAGACAAAGCAGCATTTATCACATCAAAGAATTTCAAACAAATGGEST: gi|254348280|gb|GR851959.1|GR851959
genomic: TGAATTCTCAACCGATGAAGGGAGAAAAATGCTCCATACTGAAGGATTTAggtacgcata ... tgatcttgtaGATTCTTAGACAAAGCAGCATTTATCACATCAAAGAATTTCAAACAAATGG
EST: TGAATTCTCAACCGATGAAGGGAGAAAA-TGCTCCATACTGAAG-ATTTA GATTCTTAGACAA-GCAGCATTT
genomic: TGAATTCTCAACCGATGAAGGGAGAAAAATGCTCCATACTGAAGGATTTAggtacgcata ... tgatcttgtaGATTCTTAGACAAAGCAGCATTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAAAATGGAAGGTCAAGGTGTTACAAGATGATAAACTTTACGAGGTTGATGAATTCTCAACCGATGAAGGGAGAAAAATGCTCCATACTGAAGGATTTAggtacgcatataattctctctctctccctctctcacatgcattgggtttgctaattaaaactaatattcacctcaatatagcacttttgtgtaattctct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccctc