1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCGATGACAACTTCTTCAAGCATTCCATGTCCATTTATGGAGAATGACCGGTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGGtaatattcacaattcagtactcccaacgacttgttcttttgcactgccacaatattggattaagaaattttgattcatatcaatggtctaatttaacaatctttgtcttcattttgtcaatttagaggtgacgttccttatgtctattttggtcagg
species | Glycine max |
transcript | GLYMA18G46080.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCAGAGG CACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAAEST: gi|193498170|gb|FK459148.1|FK459148
genomic: GGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGGtaatattcac ... tttggtcaggCACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAA
EST: GTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGG CACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAAEST: gi|193614929|gb|FK563779.1|FK563779
genomic: GTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGGtaatattcac ... tttggtcaggCACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAA
EST: GTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGG CACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAAEST: gi|193624077|gb|FK573019.1|FK573019
genomic: GTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGGtaatattcac ... tttggtcaggCACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAA
EST: GTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGG CACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAAEST: gi|193576322|gb|FK530395.1|FK530395
genomic: GTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGGtaatattcac ... tttggtcaggCACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAA
EST: GTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGG CACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAA
genomic: GTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGGtaatattcac ... tttggtcaggCACTAAACCTATTGATGGCTTCTTTGACATCCAACGAAGCTGCTTTCACAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGATGACAACTTCTTCAAGCATTCCATGTCCATTTATGGAGAATGACCGGTTGTTGGATGATTTGGAGGAACATTTGGTGGAAATCAGGAAGTCACAGGtaatattcacaattcagtactcccaacgacttgttcttttgcactgccacaatattggattaagaaattttgattcatatcaatggtctaatttaacaatctttgtcttcattttgtcaatttagaggtgacgttccttatgtctattttggtcagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA