1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GATGTGACCATATCATCTCCTGGGGACAGTCCTAACACAGATGGAATTCACCTTCAGAACTCCAAAGATGTGTTGATATACAGCAGCTCTATGGCCTGCGgtaagttatggaatatttccatttcatttgaacattcatagggcaatgtaggagatagagacattagctaaaatgaaaatgaaagttcaagacaagaaga...
species | Glycine max |
transcript | GLYMA18G19670.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CCTTCAGAACTCCAAAGATGTGTTGATATACAGCAGCTCTATGGCCTGCG GAGATGACTGTATTTCGATACAAACTGGNTGCTCGAACATATATGTACACAEST: gi|208088988|gb|GD887817.1|GD887817
genomic: CCTTCAGAACTCCAAAGATGTGTTGATATACAGCAGCTCTATGGCCTGCGgtaagttatg ... tattttgcagGAGATGACTGTATTTCGATACAAACTGGATGCTCGAACATATATGTACACA
EST: CAGAACTTCCTAAAGTATTGTGTTGATATACAGCAGCTCTATGGCCTGCG GAGATGACTGTATTTCGATACAAACTGGATGCTCGAACATATATGTACACA
genomic: CAGAAC-TCC-AAAG-A-TGTGTTGATATACAGCAGCTCTATGGCCTGCGgtaagttatg ... tattttgcagGAGATGACTGTATTTCGATACAAACTGGATGCTCGAACATATATGTACACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGTGACCATATCATCTCCTGGGGACAGTCCTAACACAGATGGAATTCACCTTCAGAACTCCAAAGATGTGTTGATATACAGCAGCTCTATGGCCTGCGgtaagttatggaatatttccatttcatttgaacattcatagggcaatgtaggagatagagacattagctaaaatgaaaatgaaagttcaagacaagaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaatga