1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCTGTAGATGATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaattacaaatatgagtggtttactctagatttttcataattttgaatatcaatcattgaaaattattgtatgattcacttgttgactcccctccc...
species | Glycine max |
transcript | GLYMA18G08370.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAA GGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGCEST: gi|58018272|gb|CX705014.1|CX705014
genomic: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaatta ... cttcttttcaGGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGC
EST: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAA GGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGCEST: gi|308099238|gb|HO761416.1|HO761416
genomic: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaatta ... cttcttttcaGGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGC
EST: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAA GGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGCEST: gi|214008165|gb|DB987056.1|DB987056
genomic: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaatta ... cttcttttcaGGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGC
EST: GATACACAACGCCTGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAA GGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGCEST: gi|208307969|gb|GE105449.1|GE105449
genomic: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaatta ... cttcttttcaGGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGC
EST: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAA GGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGCEST: gi|209715079|gb|BW677122.1|BW677122
genomic: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaatta ... cttcttttcaGGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGC
EST: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAA GGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGCEST: gi|17518879|gb|BM187921.1|BM187921
genomic: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaatta ... cttcttttcaGGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGC
EST: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAA GGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGCEST: gi|209729539|gb|BW651866.1|BW651866
genomic: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaatta ... cttcttttcaGGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGC
EST: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAA GGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGCEST: gi|151400645|gb|EV270459.1|EV270459
genomic: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaatta ... cttcttttcaGGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGC
EST: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAA GGGTCTGAGTGCTGAGAAAGACAATCTTGGCATAACCCAGCATGACTGGGC
genomic: GATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaatta ... cttcttttcaGGGTCTGAGTGCTGAGAAAGACAATCTTGACATAACCCAGCATGACTGGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTGTAGATGATACACAACGTATGATGCAAATGGGTGGATTTGGATTTGATCCTTCAAAggtacaattacaaatatgagtggtttactctagatttttcataattttgaatatcaatcattgaaaattattgtatgattcacttgttgactcccctccc
- - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcccct