1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AAGGCTTATTCCAGCACACAGCAAGGGCAAGCCTCCCTCATATTATATTATTGCTGGATTTGTTTTTACAACTGTTTCGGTTCCATATCTTCGTTCTGAGgtcagtggctaatccatcatccctaggcattaataattcagttatttggtgtcttaggtgttgctgtttgttttactattggtaatattgatctggatgt...
species | Glycine max |
transcript | GLYMA17G09970.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTGCTGGATTTGTTTTTACAACTGTTTCGGTTCCATATCTTCGTTCTGAG TATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGEST: gi|17964168|gb|BM270907.1|BM270907
genomic: TTGCTGGATTTGTTTTTACAACTGTTTCGGTTCCATATCTTCGTTCTGAGgtcagtggct ... gaatgaacagTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
EST: TTGCTGGATTTGTTTTTACAACTGTTTCGGTTCCATATCTTCGTTCTGAG TATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGEST: gi|6481804|gb|AW201075.1|AW201075
genomic: TTGCTGGATTTGTTTTTACAACTGTTTCGGTTCCATATCTTCGTTCTGAGgtcagtggct ... gaatgaacagTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
EST: TTGCTGGATTTGTTTTTACAACTGTTTCGGTTCCATATCTTCGTTCTGAG TATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
genomic: TTGCTGGATTTGTTTTTACAACTGTTTCGGTTCCATATCTTCGTTCTGAGgtcagtggct ... gaatgaacagTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGGCTTATTCCAGCACACAGCAAGGGCAAGCCTCCCTCATATTATATTATTGCTGGATTTGTTTTTACAACTGTTTCGGTTCCATATCTTCGTTCTGAGgtcagtggctaatccatcatccctaggcattaataattcagttatttggtgtcttaggtgttgctgtttgttttactattggtaatattgatctggatgt
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