1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATGTTGATCCAAACCTTATGATGGAGGATGAAAGTATGGTATGGACAAGCAAAGATGTTGTAATTGTGCTTGAGCATCAAAATAAAAAGATTCCTTTAAGgtgagtaaatatgatgtatggatatccagtgcttgcaaattgaagatttatacttactaattggcaacagactatgctattgtagtctgtatgaaaccat...
species | Glycine max |
transcript | GLYMA17G03880.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AAAGATGTTGTAATTGTGCTTGAGCATCAAAAT-AAAAGATTCCTTTAAG TTACGTTTCGGAAACACAAAGAAGGCATGCTCTTCCATCTCAGGCACAGCGEST: gi|254348906|gb|GR852585.1|GR852585
genomic: AAAGATGTTGTAATTGTGCTTGAGCATCAAAATAAAAAGATTCCTTTAAGgtgagtaaat ... ctttttgcagTTACGTTTCGGAAACACAAAGAAGGCATGCTCTTCCATCTCAGGCACAGCG
EST: AAAGATGTTGTAATTGTGCTTGAGCATCAAAATAAAAAGATTCCTTTAAG TTACGTTTCG-AAACACAAAGAAGGCATGCTCTTCCATC
genomic: AAAGATGTTGTAATTGTGCTTGAGCATCAAAATAAAAAGATTCCTTTAAGgtgagtaaat ... ctttttgcagTTACGTTTCGGAAACACAAAGAAGGCATGCTCTTCCATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTTGATCCAAACCTTATGATGGAGGATGAAAGTATGGTATGGACAAGCAAAGATGTTGTAATTGTGCTTGAGCATCAAAATAAAAAGATTCCTTTAAGgtgagtaaatatgatgtatggatatccagtgcttgcaaattgaagatttatacttactaattggcaacagactatgctattgtagtctgtatgaaaccat
- - - - - - - - - - - - - - - - - - - - - - - - - AAGATG