1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTAATAAGTGGCAAGAATGGGTATGATTTCAAATCTGTGAGGAGATGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAAgtaattatgttgaaaaaattatcaagttttgcttttcttataaccaatcaaattatcaaattggtttttatgctgatattttacattgtttgttcctag
species | Glycine max |
transcript | GLYMA17G03010.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GATGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAA ATATTTGTACCTATTCATAAAGAGATTCATTGGTGCTTGGCTGTTAEST: gi|193542105|gb|FK496217.1|FK496217
genomic: GATGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAAgtaattatgt ... ttgttcctagATATTTGTACCTATTCATAAAGAGATTCATTGGTGCTTGGCTGTTA
EST: GATGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAA ATATTTGTACCCTATTCATAAAGAGATTCATT
genomic: GATGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAAgtaattatgt ... ttgttcctagATATTTGTACC-TATTCATAAAGAGATTCATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTAATAAGTGGCAAGAATGGGTATGATTTCAAATCTGTGAGGAGATGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAAgtaattatgttgaaaaaattatcaagttttgcttttcttataaccaatcaaattatcaaattggtttttatgctgatattttacattgtttgttcctag
- - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA