Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAAAACCTGGGGGATTCATTCTGCTGGCCTCAACTACAAGATATGCATTTAGCAATAAAGACAAAGCCTGGATTGCAGCCGTGGCAAACAAATTTAGAGgtaatagcattagcatgtttgaagatttgtagaagagtttacacttcatttttaataaacaagtctggatttcataggaggcctttttcttcctatttag...

Basic information

species Glycine max
transcript GLYMA16G32270.2
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|11412920|gb|BF424931.1|BF424931
EST:     TAGCAATAAAGACAAAGCCTGGATTGCAGCCGTGGCAAACAAATTTAGAG                         GAAAGGTTTAACCATCTGATTACCTACTGCAATGCAAGAGTATCTGGAGTA
genomic: TAGCAATAAAGACAAAGCCTGGATTGCAGCCGTGGCAAACAAATTTAGAGgtaatagcat ... ccatatacagGAAAGGTTTAACCATCTGATTACCTACTGCAATGCAAGAGTATCTGGAGTA
EST: gi|22928149|gb|BU545288.1|BU545288
EST:     TAGCAATAAAGACAAAGCCTGGATTGCAGCCGTGGCAAACAAATTTAGAG                         GAAAGGTTTAACCATATGATTACCTNNNGCAATGCAAGAGTATCTGGAGTA
genomic: TAGCAATAAAGACAAAGCCTGGATTGCAGCCGTGGCAAACAAATTTAGAGgtaatagcat ... ccatatacagGAAAGGTTTAACCATCTGATTACCTACTGCAATGCAAGAGTATCTGGAGTA
EST: gi|18039029|gb|BM307323.1|BM307323
EST:     TAGCAATAAAGACAAAGCCTGGATTGCAGCCGTGGCAAACAAATTTAGAG                         GAAAGGTTTAACCATCTGATTACCTACTGCAATGCAAGAGTATCTGGAGTA
genomic: TAGCAATAAAGACAAAGCCTGGATTGCAGCCGTGGCAAACAAATTTAGAGgtaatagcat ... ccatatacagGAAAGGTTTAACCATCTGATTACCTACTGCAATGCAAGAGTATCTGGAGTA
EST: gi|10231970|gb|BE800858.1|BE800858
EST:     TAGCAATAAAGACAAAGCCTGGATTGCAGCCGTGGCAAACAAATTTAGAG                         GAAAGGTTTAACCATCTGATTACCTACTGCAATGCAAGAGTATCTGGAGTA
genomic: TAGCAATAAAGACAAAGCCTGGATTGCAGCCGTGGCAAACAAATTTAGAGgtaatagcat ... ccatatacagGAAAGGTTTAACCATCTGATTACCTACTGCAATGCAAGAGTATCTGGAGTA